An <i>in silico</i>Analysis of Upstream Regulatory Modules (URMs) of Tapetum Specific Genes to Identify Regulatory <i>cis</i>-Elements and Transcription Factors

• 作者: Pradeep Kumar Burma Preeti Apurve Sharma
• 来源期刊: 美国分子生物学期刊(英文)
• 学科: 医学
• 关键词: TAPETUM Specific Promoter CIS-ELEMENTS Transcription Factors
• 年，卷（期）: 2018,（1）
• 页码范围: 13-25
• 页数: 13页
• 分类号: R73

摘要

The present work presents an iin silicoi analysis of Upstream Regulatory Modules (URMs) of genes expressed in tapetum specific manner in dicotyledon and monocotyledon plants. In the current analysis, we identified several motifs conserved in these URMs of which ten were observed to be part of known icisi-elements using tools and databases like MEME, PLACE, MAST and TFSEARCH. We also identified that binding sites for two transcription factors, DOF and WRKY71 were found to be present in majority of the URMs.