Consider a time-harmonic electromagnetic plane wave incident on a biperiodic structure in R3. The periodic structure separates two homogeneous regions. The medium inside the structure is chiral and nonhomogeneous. In this paper, variational formulations coupling finite element methods in the chiral medium with a method of integral equations on the periodic interfaces are studied. The well-posedness of the continuous and discretized problems is established. Uniform convergence for the coupling variational approximations of the model problem is obtained.