A Clique-Based Approach to the Identification of Common Gene Association Sub-Networks

• 作者: Alade Tokuta Assefa Tesfay Gaolin Zheng Xinyu Huang
• 来源期刊: 应用数学(英文)
• 学科: 数学
• 关键词: Graphical Lasso Model QUADRATIC MAXIMIZATION SUBGRAPH ISOMORPHISM CLIQUE REPLICATOR Equation Gene Association Network
• 年，卷（期）: 2013,（6）
• 页码范围: 893-898
• 页数: 6页
• 分类号: O1

摘要

We developed a computational framework to identify common gene association sub-network. This framework combines graphical lasso model, graph product and a replicator equation based clique solver. We applied this method to find common stress responsive sub-networks from two related Deinococcus-Thermus bacterial species.