This article uses the conventional ecological footprint method and its improved model of ecological footprint to analyze the state of the sustainable development of Wuhan City in 2009, the results show that the per capita ecological deficit calculated by the method of emergy ecological footprint is 3.8629 hm2, and the per capita ecological deficit calculated by the method of conventional ecological footprint is 2.0169 hm2. The results obtained by the two methods respectively show that current development of Wuhan is unsustainable. The emergy ecological footprint method introduces the energy flow to reflect the relationship between human resource demand and supply of nature to human and adopts parameters—emergy conversion rate and energy density to calculate the ecological carrying capacity data which is more accurate.